Hi Colin, I was able to update the sonar server to 8.3. But I am not seeing any changes in the analysis. I enabled debug logs like you suggested and I am seeing logs like you mentioned -
[2020-05-27T16:40:35.766Z] 16:40:35.559 INFO: Pull request 3756 for merge into master from PR-3756
[2020-05-27T16:40:35.766Z] 16:40:35.589 INFO: SCM collecting changed files in the branch
[2020-05-27T16:40:35.766Z] 16:40:35.616 DEBUG: file=<workspace>/.git/config, create new FileSnapshot: lastRead=2020-05-27 16:40:35.614000000, lastModified=2020-05-27 16:40:31.397891000, size=199, fileKey=(dev=10302,ino=64256003)
[2020-05-27T16:40:35.766Z] 16:40:35.620 DEBUG: file=null, size changed from -1 to 146 bytes
[2020-05-27T16:40:35.766Z] 16:40:35.620 DEBUG: loading config FileBasedConfig[/root/.config/jgit/config]
[2020-05-27T16:40:35.766Z] 16:40:35.621 DEBUG: file=/root/.config/jgit/config, create new FileSnapshot: lastRead=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, size=146, fileKey=(dev=34,ino=80656636)
[2020-05-27T16:40:35.766Z] 16:40:35.622 DEBUG: readpipe [git, --version],/usr/bin
[2020-05-27T16:40:35.766Z] 16:40:35.654 DEBUG: readpipe may return 'git version 2.17.1'
[2020-05-27T16:40:35.766Z] 16:40:35.654 DEBUG: remaining output:
[2020-05-27T16:40:35.766Z]
[2020-05-27T16:40:35.766Z] 16:40:35.655 DEBUG: readpipe [git, config, --system, --edit],/usr/bin
[2020-05-27T16:40:35.766Z] 16:40:35.659 DEBUG: readpipe may return '/etc/gitconfig'
[2020-05-27T16:40:35.766Z] 16:40:35.659 DEBUG: remaining output:
[2020-05-27T16:40:35.766Z]
[2020-05-27T16:40:35.766Z] 16:40:35.659 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.766Z] 16:40:35.659 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:35.766Z] 16:40:35.660 DEBUG: file=null, size changed from -1 to 0 bytes
[2020-05-27T16:40:35.767Z] 16:40:35.660 DEBUG: loading config FileBasedConfig[/etc/gitconfig]
[2020-05-27T16:40:35.767Z] 16:40:35.660 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.660 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.660 DEBUG: file=/etc/gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=1970-01-01 00:00:00.000000000, delta=1590597635660000000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.660 DEBUG: file=/etc/gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.660 DEBUG: file=null, size changed from -1 to 48 bytes
[2020-05-27T16:40:35.767Z] 16:40:35.660 DEBUG: loading config FileBasedConfig[/root/.gitconfig]
[2020-05-27T16:40:35.767Z] 16:40:35.660 DEBUG: file=/root/.gitconfig, create new FileSnapshot: lastRead=2020-05-27 16:40:35.660000000, lastModified=2020-05-27 16:40:31.709893000, size=48, fileKey=(dev=34,ino=80646929)
[2020-05-27T16:40:35.767Z] 16:40:35.661 DEBUG: file=<workspace>/.git/config, create new FileSnapshot: lastRead=2020-05-27 16:40:35.661000000, lastModified=2020-05-27 16:40:31.397891000, size=199, fileKey=(dev=10302,ino=64256003)
[2020-05-27T16:40:35.767Z] 16:40:35.662 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.662 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.662 DEBUG: file=/etc/gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=1970-01-01 00:00:00.000000000, delta=1590597635660000000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.662 DEBUG: file=/etc/gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.663 DEBUG: file=/root/.gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=2020-05-27 16:40:31.709893000, delta=3950107000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.663 DEBUG: file=/root/.gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.663 DEBUG: file=<workspace>/.git/config, isRacyClean=false, read=2020-05-27 16:40:35.661000000, lastModified=2020-05-27 16:40:31.397891000, delta=4263109000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.663 DEBUG: file=<workspace>/.git/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.694 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.694 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.694 DEBUG: file=/etc/gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=1970-01-01 00:00:00.000000000, delta=1590597635660000000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.694 DEBUG: file=/etc/gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.695 DEBUG: file=/root/.gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=2020-05-27 16:40:31.709893000, delta=3950107000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.695 DEBUG: file=/root/.gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=<workspace>/.git/index, create new FileSnapshot: lastRead=2020-05-27 16:40:35.683000000, lastModified=2020-05-27 16:40:33.173906000, size=3907090, fileKey=(dev=10302,ino=64256020)
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=/etc/gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=1970-01-01 00:00:00.000000000, delta=1590597635660000000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=/etc/gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=/root/.gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=2020-05-27 16:40:31.709893000, delta=3950107000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=/root/.gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=<workspace>/.git/config, isRacyClean=false, read=2020-05-27 16:40:35.661000000, lastModified=2020-05-27 16:40:31.397891000, delta=4263109000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.696 DEBUG: file=<workspace>/.git/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.697 DEBUG: file=<workspace>/.git/refs/heads/master, create new FileSnapshot: lastRead=2020-05-27 16:40:35.696000000, lastModified=2020-05-27 16:40:33.177906000, size=41, fileKey=(dev=10302,ino=64256023)
[2020-05-27T16:40:35.767Z] 16:40:35.698 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.698 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.698 DEBUG: file=/etc/gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=1970-01-01 00:00:00.000000000, delta=1590597635660000000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.698 DEBUG: file=/etc/gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.699 DEBUG: file=/root/.gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=2020-05-27 16:40:31.709893000, delta=3950107000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.699 DEBUG: file=/root/.gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.699 DEBUG: file=<workspace>/.git/config, isRacyClean=false, read=2020-05-27 16:40:35.661000000, lastModified=2020-05-27 16:40:31.397891000, delta=4263109000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.699 DEBUG: file=<workspace>/.git/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.723 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.724 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.724 DEBUG: file=/etc/gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=1970-01-01 00:00:00.000000000, delta=1590597635660000000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.724 DEBUG: file=/etc/gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.724 DEBUG: file=/root/.gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=2020-05-27 16:40:31.709893000, delta=3950107000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.724 DEBUG: file=/root/.gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.725 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.725 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.725 DEBUG: file=/etc/gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=1970-01-01 00:00:00.000000000, delta=1590597635660000000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.725 DEBUG: file=/etc/gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.725 DEBUG: file=/root/.gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=2020-05-27 16:40:31.709893000, delta=3950107000 ns, racy<=2500000000 ns
[2020-05-27T16:40:35.767Z] 16:40:35.725 DEBUG: file=/root/.gitconfig, is unmodified
[2020-05-27T16:40:35.767Z] 16:40:35.732 DEBUG: file=null, size changed from -1 to 4096 bytes
[2020-05-27T16:40:35.767Z] 16:40:35.732 DEBUG: file=<workspace>/.git/objects/pack, create new FileSnapshot: lastRead=2020-05-27 16:40:35.732000000, lastModified=2020-05-27 04:12:55.253583000, size=4096, fileKey=(dev=10302,ino=64267738)
[2020-05-27T16:40:35.767Z] 16:40:35.737 DEBUG: file=<workspace>/.git/objects/pack/pack-67b5653c768c3636d01d6c781aed9b802f8e1ed8.pack, create new FileSnapshot: lastRead=2020-05-27 16:40:35.736000000, lastModified=2020-05-27 16:40:33.000000000, size=1411923032, fileKey=(dev=10302,ino=64267745)
[2020-05-27T16:40:35.767Z] 16:40:35.737 DEBUG: file=<workspace>/.git/objects/pack/pack-4acaa7be6d34931e3442a4df5739c3f23ba1fe9d.pack, create new FileSnapshot: lastRead=2020-05-27 16:40:35.737000000, lastModified=2020-05-27 16:40:33.000000000, size=68515, fileKey=(dev=10302,ino=64277770)
[2020-05-27T16:40:35.767Z] 16:40:35.737 DEBUG: file=<workspace>/.git/objects/pack/pack-896c291ac7269c1fb2b241c533337a63b93e34bd.pack, create new FileSnapshot: lastRead=2020-05-27 16:40:35.737000000, lastModified=2020-05-27 16:40:33.000000000, size=126303, fileKey=(dev=10302,ino=64279639)
[2020-05-27T16:40:35.767Z] 16:40:35.737 DEBUG: file=<workspace>/.git/objects/pack/pack-a9976090065f018e519c001aac001645f330016c.pack, create new FileSnapshot: lastRead=2020-05-27 16:40:35.737000000, lastModified=2020-05-27 16:40:33.000000000, size=98971, fileKey=(dev=10302,ino=64279616)
[2020-05-27T16:40:35.767Z] 16:40:35.737 DEBUG: file=<workspace>/.git/objects/pack/pack-ae920801cf07c49f91add6c64f04081b20746738.pack, create new FileSnapshot: lastRead=2020-05-27 16:40:35.737000000, lastModified=2020-05-27 16:40:33.000000000, size=123351, fileKey=(dev=10302,ino=64279594)
[2020-05-27T16:40:36.024Z] 16:40:35.839 DEBUG: Opening pack index <workspace>/.git/objects/pack/pack-67b5653c768c3636d01d6c781aed9b802f8e1ed8.idx, size 37.509 MB took 98 ms
[2020-05-27T16:40:36.024Z] 16:40:35.839 DEBUG: Opening pack index <workspace>/.git/objects/pack/pack-4acaa7be6d34931e3442a4df5739c3f23ba1fe9d.idx, size 0.005 MB took 0 ms
[2020-05-27T16:40:36.024Z] 16:40:35.840 DEBUG: Opening pack index <workspace>/.git/objects/pack/pack-896c291ac7269c1fb2b241c533337a63b93e34bd.idx, size 0.005 MB took 0 ms
[2020-05-27T16:40:36.024Z] 16:40:35.841 DEBUG: Opening pack index <workspace>/.git/objects/pack/pack-a9976090065f018e519c001aac001645f330016c.idx, size 0.005 MB took 1 ms
[2020-05-27T16:40:36.024Z] 16:40:35.842 DEBUG: Opening pack index <workspace>/.git/objects/pack/pack-ae920801cf07c49f91add6c64f04081b20746738.idx, size 0.011 MB took 1 ms
[2020-05-27T16:40:36.024Z] 16:40:35.842 DEBUG: file=<workspace>/.git/objects/pack, isRacyClean=false, read=2020-05-27 16:40:35.732000000, lastModified=2020-05-27 04:12:55.253583000, delta=44860478417000 ns, racy<=14992500 ns
[2020-05-27T16:40:36.024Z] 16:40:35.842 DEBUG: file=<workspace>/.git/objects/pack, is unmodified
[2020-05-27T16:40:36.024Z] 16:40:35.846 DEBUG: file=/root/.config/jgit/config, isRacyClean=false, read=2020-05-27 16:40:35.620000000, lastModified=2020-05-26 16:51:58.489008000, delta=85717130992000 ns, racy<=2500000000 ns
[2020-05-27T16:40:36.024Z] 16:40:35.846 DEBUG: file=/root/.config/jgit/config, is unmodified
[2020-05-27T16:40:36.024Z] 16:40:35.847 DEBUG: file=/etc/gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=1970-01-01 00:00:00.000000000, delta=1590597635660000000 ns, racy<=2500000000 ns
[2020-05-27T16:40:36.024Z] 16:40:35.848 DEBUG: file=/etc/gitconfig, is unmodified
[2020-05-27T16:40:36.024Z] 16:40:35.848 DEBUG: file=/root/.gitconfig, isRacyClean=false, read=2020-05-27 16:40:35.660000000, lastModified=2020-05-27 16:40:31.709893000, delta=3950107000 ns, racy<=2500000000 ns
[2020-05-27T16:40:36.024Z] 16:40:35.848 DEBUG: file=/root/.gitconfig, is unmodified
[2020-05-27T16:40:36.024Z] 16:40:35.848 DEBUG: file=<workspace>/.git/config, isRacyClean=false, read=2020-05-27 16:40:35.661000000, lastModified=2020-05-27 16:40:31.397891000, delta=4263109000 ns, racy<=2500000000 ns
[2020-05-27T16:40:36.024Z] 16:40:35.848 DEBUG: file=<workspace>/.git/config, is unmodified
[2020-05-27T16:40:36.024Z] 16:40:35.849 DEBUG: file=<workspace>/.git/HEAD, create new FileSnapshot: lastRead=2020-05-27 16:40:35.848000000, lastModified=2020-05-27 16:40:31.581892000, size=23, fileKey=(dev=10302,ino=64256006)
[2020-05-27T16:40:36.024Z] 16:40:35.850 DEBUG: file=<workspace>/.git/refs/heads/master, isRacyClean=false, read=2020-05-27 16:40:35.696000000, lastModified=2020-05-27 16:40:33.177906000, delta=2518094000 ns, racy<=14992500 ns
[2020-05-27T16:40:36.024Z] 16:40:35.850 DEBUG: file=<workspace>/.git/refs/heads/master, is unmodified
[2020-05-27T16:40:36.024Z] 16:40:35.851 DEBUG: file=<workspace>/.git/objects/pack, isRacyClean=false, read=2020-05-27 16:40:35.732000000, lastModified=2020-05-27 04:12:55.253583000, delta=44860478417000 ns, racy<=14992500 ns
[2020-05-27T16:40:36.024Z] 16:40:35.851 DEBUG: file=<workspace>/.git/objects/pack, is unmodified
[2020-05-27T16:40:36.024Z] 16:40:35.851 DEBUG: file=<workspace>/.git/objects/pack, isRacyClean=false, read=2020-05-27 16:40:35.732000000, lastModified=2020-05-27 04:12:55.253583000, delta=44860478417000 ns, racy<=14992500 ns
[2020-05-27T16:40:36.024Z] 16:40:35.852 DEBUG: file=<workspace>/.git/objects/pack, is unmodified
[2020-05-27T16:40:36.024Z] 16:40:35.852 DEBUG: Merge base sha1: 8888888888888888888