Hi,
Welcome to the community!
I suspect something has gone sideways with your sources and inclusions configurations.
As a side note, sonar.sources accepts a comma-delimited list, so this would be a (marginally) better configuration:
sonar.sources application/models,application/controllers
Can you share your analysis log?
The analysis / scanner log is what’s output from the analysis command. Hopefully, the log you provide - redacted as necessary - will include that command as well.
This guide will help you find them.
Ann