Background Task fails

matthiash · October 2, 2020, 8:39am

SonarQube version: 8.4.2 (build 36762)
build-wrapper, version 6.5 (macosx-x86)
INFO: SonarQube Scanner 2.5
INFO: Java 1.8.0_91 Oracle Corporation (64-bit)
INFO: Mac OS X 10.15.6 x86_64

The background task for one of our projects is failing on the master branch. Scans for issue branches are working fine. The background task fails with the following error details

Error Details

org.sonar.ce.task.projectanalysis.component.VisitException: Visit of Component {key=com.isec7.med:android:src/main/java/com/isec7/android/med/ui/fragments/folder/FolderFragment.java,type=FILE} failed
	at org.sonar.ce.task.projectanalysis.component.VisitException.rethrowOrWrap(VisitException.java:44)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:74)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitChildren(VisitorsCrawler.java:110)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitImpl(VisitorsCrawler.java:97)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:72)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitChildren(VisitorsCrawler.java:110)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitImpl(VisitorsCrawler.java:97)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:72)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitChildren(VisitorsCrawler.java:110)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitImpl(VisitorsCrawler.java:97)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:72)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitChildren(VisitorsCrawler.java:110)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitImpl(VisitorsCrawler.java:97)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:72)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitChildren(VisitorsCrawler.java:110)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitImpl(VisitorsCrawler.java:97)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:72)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitChildren(VisitorsCrawler.java:110)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitImpl(VisitorsCrawler.java:97)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:72)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitChildren(VisitorsCrawler.java:110)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitImpl(VisitorsCrawler.java:97)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:72)
	at org.sonar.ce.task.projectanalysis.step.ExecuteVisitorsStep.execute(ExecuteVisitorsStep.java:51)
	at org.sonar.ce.task.step.ComputationStepExecutor.executeStep(ComputationStepExecutor.java:81)
	at org.sonar.ce.task.step.ComputationStepExecutor.executeSteps(ComputationStepExecutor.java:72)
	at org.sonar.ce.task.step.ComputationStepExecutor.execute(ComputationStepExecutor.java:59)
	at org.sonar.ce.task.projectanalysis.taskprocessor.ReportTaskProcessor.process(ReportTaskProcessor.java:81)
	at org.sonar.ce.taskprocessor.CeWorkerImpl$ExecuteTask.executeTask(CeWorkerImpl.java:235)
	at org.sonar.ce.taskprocessor.CeWorkerImpl$ExecuteTask.run(CeWorkerImpl.java:217)
	at org.sonar.ce.taskprocessor.CeWorkerImpl.findAndProcessTask(CeWorkerImpl.java:162)
	at org.sonar.ce.taskprocessor.CeWorkerImpl$TrackRunningState.get(CeWorkerImpl.java:137)
	at org.sonar.ce.taskprocessor.CeWorkerImpl.call(CeWorkerImpl.java:89)
	at org.sonar.ce.taskprocessor.CeWorkerImpl.call(CeWorkerImpl.java:53)
	at com.google.common.util.concurrent.TrustedListenableFutureTask$TrustedFutureInterruptibleTask.runInterruptibly(TrustedListenableFutureTask.java:125)
	at com.google.common.util.concurrent.InterruptibleTask.run(InterruptibleTask.java:69)
	at com.google.common.util.concurrent.TrustedListenableFutureTask.run(TrustedListenableFutureTask.java:78)
	at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
	at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
	at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:304)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
	at java.base/java.lang.Thread.run(Thread.java:834)
Caused by: java.lang.IllegalStateException: Fail to process issues of component 'com.isec7.med:android:src/main/java/com/isec7/android/med/ui/fragments/folder/FolderFragment.java'
	at org.sonar.ce.task.projectanalysis.issue.IntegrateIssuesVisitor.visitAny(IntegrateIssuesVisitor.java:66)
	at org.sonar.ce.task.projectanalysis.component.TypeAwareVisitorWrapper.visitAny(TypeAwareVisitorWrapper.java:77)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitNode(VisitorsCrawler.java:117)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visitImpl(VisitorsCrawler.java:100)
	at org.sonar.ce.task.projectanalysis.component.VisitorsCrawler.visit(VisitorsCrawler.java:72)
	... 41 more
Caused by: java.lang.NullPointerException
	at org.sonar.ce.task.projectanalysis.issue.IssueLifecycle.copyFields(IssueLifecycle.java:198)
	at org.sonar.ce.task.projectanalysis.issue.IssueLifecycle.copyAttributesOfIssueFromAnotherBranch(IssueLifecycle.java:114)
	at org.sonar.ce.task.projectanalysis.issue.IssueLifecycle.mergeConfirmedOrResolvedFromPr(IssueLifecycle.java:106)
	at org.sonar.ce.task.projectanalysis.issue.SiblingsIssueMerger.tryMerge(SiblingsIssueMerger.java:58)
	at org.sonar.ce.task.projectanalysis.issue.IntegrateIssuesVisitor.fillNewOpenIssues(IntegrateIssuesVisitor.java:79)
	at org.sonar.ce.task.projectanalysis.issue.IntegrateIssuesVisitor.visitAny(IntegrateIssuesVisitor.java:60)
	... 45 more

ganncamp · October 2, 2020, 11:54am

Hi,

It looks like at least the first line of the error is missing. Could you provide the entire thing and maybe even a line or two before the error?

Thx,
Ann

matthiash · October 2, 2020, 12:13pm

Hi Ann,

thats actually everything that is available. See Screenshot

Regards Matthias

matthiash · October 2, 2020, 12:33pm

Just realised you are probable asking for the logs. Find attached log file.ce.log (10.3 KB)

dmeneses · October 20, 2020, 8:15pm

Hello,
Looking at the error, the only explanation I can find is that there is a corruption in the DB.
Do you have access to the DB to run some queries?

matthiash · October 21, 2020, 7:11am

Yes, I have access to the database and can run some queries.

We had some issues with an update which might be the cause for this. Would be great to resolve this without losing the history for the project.

dmeneses · October 22, 2020, 7:23pm

What kind of issues? If the primary key constraint is present for the kee column of the issues table, I don’t see how this problem could occur.

matthiash · October 23, 2020, 8:00am

We are getting the mentioned before error for the master background tasks. I can check the database but would need some information on what exactly to check.

1112 · November 12, 2020, 8:59am

I also encountered the same problem, have you solved this problem?

Carl · December 1, 2022, 2:13pm

I’m encountering a similar problem after upgrading to 9.7.1. Master analysis is failing. Is there any guide on what to look for and solve in the database?

org.sonar.ce.task.projectanalysis.component.VisitException: Visit of Component {key=<project>:<C++ header file in project>,uuid=AYBqK7eNHieUv3R8V52S,type=FILE} failed

at org.sonar.ce.task.projectanalysis.component.VisitException.rethrowOrWrap(VisitException.java:44)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visit(DepthTraversalTypeAwareCrawler.java:41)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitChildren(DepthTraversalTypeAwareCrawler.java:95)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitImpl(DepthTraversalTypeAwareCrawler.java:54)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visit(DepthTraversalTypeAwareCrawler.java:39)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitChildren(DepthTraversalTypeAwareCrawler.java:95)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitImpl(DepthTraversalTypeAwareCrawler.java:54)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visit(DepthTraversalTypeAwareCrawler.java:39)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitChildren(DepthTraversalTypeAwareCrawler.java:95)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitImpl(DepthTraversalTypeAwareCrawler.java:54)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visit(DepthTraversalTypeAwareCrawler.java:39)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitChildren(DepthTraversalTypeAwareCrawler.java:95)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitImpl(DepthTraversalTypeAwareCrawler.java:54)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visit(DepthTraversalTypeAwareCrawler.java:39)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitChildren(DepthTraversalTypeAwareCrawler.java:95)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitImpl(DepthTraversalTypeAwareCrawler.java:54)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visit(DepthTraversalTypeAwareCrawler.java:39)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitChildren(DepthTraversalTypeAwareCrawler.java:95)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitImpl(DepthTraversalTypeAwareCrawler.java:54)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visit(DepthTraversalTypeAwareCrawler.java:39)

at org.sonar.ce.task.projectanalysis.source.PersistFileSourcesStep.execute(PersistFileSourcesStep.java:73)

at org.sonar.ce.task.step.ComputationStepExecutor.executeStep(ComputationStepExecutor.java:79)

at org.sonar.ce.task.step.ComputationStepExecutor.executeSteps(ComputationStepExecutor.java:70)

at org.sonar.ce.task.step.ComputationStepExecutor.execute(ComputationStepExecutor.java:57)

at org.sonar.ce.task.projectanalysis.taskprocessor.ReportTaskProcessor.process(ReportTaskProcessor.java:75)

at org.sonar.ce.taskprocessor.CeWorkerImpl$ExecuteTask.executeTask(CeWorkerImpl.java:212)

at org.sonar.ce.taskprocessor.CeWorkerImpl$ExecuteTask.run(CeWorkerImpl.java:194)

at org.sonar.ce.taskprocessor.CeWorkerImpl.findAndProcessTask(CeWorkerImpl.java:160)

at org.sonar.ce.taskprocessor.CeWorkerImpl$TrackRunningState.get(CeWorkerImpl.java:135)

at org.sonar.ce.taskprocessor.CeWorkerImpl.call(CeWorkerImpl.java:87)

at org.sonar.ce.taskprocessor.CeWorkerImpl.call(CeWorkerImpl.java:53)

at com.google.common.util.concurrent.TrustedListenableFutureTask$TrustedFutureInterruptibleTask.runInterruptibly(TrustedListenableFutureTask.java:131)

at com.google.common.util.concurrent.InterruptibleTask.run(InterruptibleTask.java:74)

at com.google.common.util.concurrent.TrustedListenableFutureTask.run(TrustedListenableFutureTask.java:82)

at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)

at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)

at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:304)

at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)

at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)

at java.base/java.lang.Thread.run(Thread.java:829)

Caused by: java.lang.IllegalStateException: Cannot persist sources of <project>:<C++ header file in project>

at org.sonar.ce.task.projectanalysis.source.PersistFileSourcesStep$FileSourceVisitor.visitFile(PersistFileSourcesStep.java:99)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitNode(DepthTraversalTypeAwareCrawler.java:76)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visitImpl(DepthTraversalTypeAwareCrawler.java:51)

at org.sonar.ce.task.projectanalysis.component.DepthTraversalTypeAwareCrawler.visit(DepthTraversalTypeAwareCrawler.java:39)

... 38 more

Caused by: java.lang.IllegalStateException: Failed to read '/opt/sonarqube/temp/ce/5377421360800459520/150952544466248886/hashes-252'

at org.sonar.ce.task.projectanalysis.source.SourceLinesHashCache.load(SourceLinesHashCache.java:86)

at org.sonar.ce.task.projectanalysis.source.SourceLinesHashCache.get(SourceLinesHashCache.java:61)

at org.sonar.ce.task.projectanalysis.source.SourceLinesHashRepositoryImpl.getLineHashesComputerToPersist(SourceLinesHashRepositoryImpl.java:70)

at org.sonar.ce.task.projectanalysis.source.FileSourceDataComputer.compute(FileSourceDataComputer.java:48)

at org.sonar.ce.task.projectanalysis.source.PersistFileSourcesStep$FileSourceVisitor.visitFile(PersistFileSourcesStep.java:96)

... 41 more

Caused by: java.nio.file.NoSuchFileException: /opt/sonarqube/temp/ce/5377421360800459520/150952544466248886/hashes-252

at java.base/sun.nio.fs.UnixException.translateToIOException(UnixException.java:92)

at java.base/sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:111)

at java.base/sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:116)

at java.base/sun.nio.fs.UnixFileSystemProvider.newByteChannel(UnixFileSystemProvider.java:219)

at java.base/java.nio.file.Files.newByteChannel(Files.java:371)

at java.base/java.nio.file.Files.newByteChannel(Files.java:422)

at java.base/java.nio.file.spi.FileSystemProvider.newInputStream(FileSystemProvider.java:420)

at java.base/java.nio.file.Files.newInputStream(Files.java:156)

at java.base/java.nio.file.Files.newBufferedReader(Files.java:2839)

at java.base/java.nio.file.Files.readAllLines(Files.java:3330)

at org.sonar.ce.task.projectanalysis.source.SourceLinesHashCache.load(SourceLinesHashCache.java:84)

... 45 more

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