Hi @LorenzoBettini,
thanks for all the info 
I will look into that and come back to you. I think I already found the root cause, but I have to check that. We filter out metadata folders from various version control systems but instead of checking for .git/ we check for .git in the absolute path of resources 
Let me confirm this and if my assumption is correct, I will implement a fix for that.
Best,
Tobias
Hi @LorenzoBettini,
I fixed the TICKET. You might want to test that it works by using a build from our Dogfooding Eclipse Update Site.
This will be shipped with the next release in roughly 1 1/2 weeks otherwise!
Best,
Tobias
It does work! 
Thank you for fixing that.
I still get the same popup when I start Eclipse, but at least everything else works also on my projects containing “.github” in the name!
Hey @LorenzoBettini,
thanks for confirming that it works.
The popup is then triggered by another error in the logs. For this, feel free to open another thread as this is going to explode otherwise 
All the best,
Tobias
OK, but I can anticipate that I’ve been getting that popup error for several weeks and “open console” never showed anything… I’ll investigate further.
Thanks again for fixing the main issue!
This update (SonarQube for Eclipse 11.3.0.82692) fixed the issue I reported as well. Thank you!
@tobias.hahnen hasn’t the fixed version been released yet?
Hi @LorenzoBettini,
no, we release roughly every two weeks. The upcoming release fixing the issue is scheduled for later today and should then be available or early tomorrow morning!
Best,
Tobias
Hi @LorenzoBettini, @jniel,
We just released 11.4.0.82756 containing the fixes. There was an issue with the Eclipse Marketplace Client (on the side of the Eclipse Foundation, not us) so the update might not be shown to you yet. It will come, I promise, pinky swear 
As this thread is already big enough, for further issues, please open a separate thread!
Best,
Tobias